{"id":1277,"date":"2013-04-06T18:24:13","date_gmt":"2013-04-06T18:24:13","guid":{"rendered":"http:\/\/www.kriesi.at\/themes\/enfold\/?page_id=1277"},"modified":"2024-07-20T12:59:31","modified_gmt":"2024-07-20T12:59:31","slug":"publications","status":"publish","type":"page","link":"https:\/\/compbio.ru\/ru\/publications\/","title":{"rendered":"\u041f\u0443\u0431\u043b\u0438\u043a\u0430\u0446\u0438\u0438"},"content":{"rendered":"

\u041f\u0443\u0431\u043b\u0438\u043a\u0430\u0446\u0438\u0438<\/h2>\n<\/div><\/section>\n
<\/span><\/span><\/div>\n
All<\/a>\/<\/span><\/div>
2018<\/a>\/<\/span><\/div>
2019<\/a>\/<\/span><\/div>
2020<\/a>\/<\/span><\/div>
2021<\/a>\/<\/span><\/div>
2022<\/a>\/<\/span><\/div>
2023<\/a>\/<\/span><\/div>
2024<\/a>\/<\/span><\/div><\/div>\n

Bate-Eya LT, Albayrak G, Carr SM, Shrestha A, Kanapin A, Samsonova A, La Thangue NB. Sustained cancer-relevant alternative RNA splicing events driven by PRMT5 in high-risk neuroblastoma. Mol Oncol. 2024 Jul 17. doi: 10.1002\/1878-0261.13702. Epub ahead of print. PMID: 39021294.<\/p>\n<\/div><\/div><\/div><\/section>\n

Yuditskiy K, Bezdvornykh I, Kazantseva A, Kanapin A, Samsonova A. BSXplorer: analytical framework for exploratory analysis of BS-seq data. BMC Bioinformatics. 2024 Mar 4;25(1):96. doi: 10.1186\/s12859-024-05722-9. PMID: 38438881; PMCID: PMC10913661.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kazantseva A, Davydova Y, Enikeeva R, Mustafin R, Malykh S, Lobaskova M, Kanapin A, Prokopenko I, Khusnutdinova E. A Combined Effect of Polygenic Scores and Environmental Factors on Individual Differences in Depression Level. Genes (Basel). 2023 Jun 27;14(7):1355. doi: 10.3390\/genes14071355. PMID: 37510260; PMCID: PMC10379734.<\/p>\n<\/div><\/div><\/div><\/section>\n

Wang RR, Dong PP, Hirata D, Abduriyim S. Mitochondrial DNA analyses revealed distinct lineages in an alpine mammal, Siberian ibex (Capra sibirica<\/i>) in Xinjiang, China. Ecol Evol. 2023 Aug 2;13(8):e10288. doi: 10.1002\/ece3.10288. PMID: 37539073; PMCID: PMC10396667.<\/p>\n<\/div><\/div><\/div><\/section>\n

\u0421\u0430\u043c\u0441\u043e\u043d\u043e\u0432\u0430 A. A., \u041a\u0430\u043d\u0430\u043f\u0438\u043d A. A., \u0427\u0435\u0440\u043d\u044f\u0435\u0432\u0430 \u0415. \u041d., \u0410\u0431\u0440\u0430\u043c\u043e\u0432 \u0418. \u0421., \u0428\u0438\u043f\u0443\u043b\u0438\u043d \u0413. \u0410.
\n\u041f\u0435\u0440\u0441\u043f\u0435\u043a\u0442\u0438\u0432\u044b \u0440\u0430\u0437\u0432\u0438\u0442\u0438\u044f \u0441\u0438\u0441\u0442\u0435\u043c\u044b \u0433\u0435\u043d\u043e\u043c\u043d\u043e\u0438\u0306 \u043c\u0435\u0434\u0438\u0446\u0438\u043d\u044b \u0432 \u0420\u043e\u0441\u0441\u0438\u0438.
\n2023, \u0420\u041e\u0421\u0421\u0418\u0418\u0306\u0421\u041a\u0418\u0418\u0306 \u0416\u0423\u0420\u041d\u0410\u041b \u041f\u0415\u0420\u0421\u041e\u041d\u0410\u041b\u0418\u0417\u0418\u0420\u041e\u0412\u0410\u041d\u041d\u041e\u0418\u0306 \u041c\u0415\u0414\u0418\u0426\u0418\u041d\u042b \u0422\u043e\u043c 3, \u041d\u043e\u043c\u0435\u0440 3,\u00a0 \u0441\u0442\u0440. 99-107<\/p>\n<\/div><\/div><\/div><\/section>\n

Tamazian G, Cherkasov N, Kanapin A, Samsonova A.
\nPygenomics: manipulating genomic intervals and data files in Python.
\nBioinformatics. 2023 May 25:btad346.
\ndoi: 10.1093\/bioinformatics\/btad346. PMID: 37228014.<\/p>\n<\/div><\/div><\/div><\/section>\n

Bezdvornykh I, Cherkasov N, Kanapin A, Samsonova A.
\nA collection of read depth profiles at structural variant breakpoints.
\nSci Data. 2023 Apr 6;10(1):186.
\ndoi: 10.1038\/s41597-023-02076-4. PMID: 37024526; PMCID: PMC10079824.<\/p>\n<\/div><\/div><\/div><\/section>\n

Houck ML, Koepfli KP, Hains T, Khan R, Charter SJ, Fronczek JA, Misuraca AC, Kliver S, Perelman PL, Beklemisheva V, Graphodatsky A, Luo SJ, O’Brien SJ, Lim NT, Chin JSC, Guerra V, Tamazian G, Omer A, Weisz D, Kaemmerer K, Sturgeon G, Gaspard J, Hahn A, McDonough M, Garcia-Trevi\u00f1o I, Gentry J, Coke RL, Janecka JE, Harrigan RJ, Tinsman J, Smith TB, Aiden EL, Dudchenko O.
\nChromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity.
\nChromosome Res. 2023 Apr 12;31(2):13.
\ndoi: 10.1007\/s10577-023-09722-y. PMID: 37043058.<\/p>\n<\/div><\/div><\/div><\/section>\n

Baron M. and Malov S.V.<\/span>
\nDetection and estimation of multiple transient changes.<\/span>
\nJournal of Applied Statistics.<\/span>\u00a02023.
\ndoi: 10.1080\/02664763.2023.2174257<\/span><\/p>\n<\/div><\/div><\/div><\/section>\n

Engovatova AV, Alborova IE, Mustafin KK , Lunkov VY , Lunkova YV, Kanapin AA, Samsonova AA, Mednikova MB.
\n<\/span>Ancient DNA of the Bearers of the Fatyanovo and Abashevo Cultures (Concerning Migrations of the Bronze Age people in the Forest Belt on the Russian Plain).
\nStratum plus. 2023. No2. doi: 10.55086\/sp232207228<\/p>\n<\/div><\/div><\/div><\/section>\n

Gretsova M, Surkova S, Kanapin A, Samsonova A, Logacheva M, Shcherbakov A, Logachev A, Bankin M, Nuzhdin S, Samsonova M.
\nTranscriptomic Analysis of Flowering Time Genes in Cultivated Chickpea and Wild\u00a0Cicer<\/i>.
\nInt J Mol Sci. 2023 Jan 31;24(3):2692. doi: 10.3390\/ijms24032692. PMID: 36769014; PMCID: PMC9916832.<\/p>\n<\/div><\/div><\/div><\/section>\n

Yakupova A, Tomarovsky A, Totikov A, Beklemisheva V, Logacheva M, Perelman PL, Komissarov A, Dobrynin P, Krasheninnikova K, Tamazian G, Serdyukova NA, Rayko M, Bulyonkova T, Cherkasov N, Pylev V, Peterfeld V, Penin A, Balanovska E, Lapidus A, Dna Zoo Consortium, OBrien SJ, Graphodatsky A, Koepfli KP, Kliver S.
\nChromosome-Length Assembly of the Baikal Seal (Pusa sibirica<\/i>) Genome Reveals a Historically Large Population Prior to Isolation in Lake Baikal.
\nGenes (Basel). 2023 Feb 28;14(3):619.
\ndoi: 10.3390\/genes14030619. PMID: 36980891; PMCID: PMC10048373.<\/p>\n<\/div><\/div><\/div><\/section>\n

Barczak W, Carr SM, Liu G, Munro S, Nicastri A, Lee LN, Hutchings C, Ternette N, Klenerman P, Kanapin A, Samsonova A, La Thangue NB.
\nLong non-coding RNA-derived peptides are immunogenic and drive a potent anti-tumour response.
\nNat Commun. 2023 Feb 25;14(1):1078.
\ndoi: 10.1038\/s41467-023-36826-0. PMID: 36841868; PMCID: PMC9968330.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kanapin A, Rozhmina T, Bankin M, Surkova S, Duk M, Osyagina E, Samsonova M.
\nGenetic Determinants of Fiber-Associated Traits in Flax Identified by Omics Data Integration.
\nInt J Mol Sci. 2022 Nov 22;23(23):14536.
\ndoi: 10.3390\/ijms232314536. PMID: 36498863; PMCID: PMC9738745.<\/p>\n<\/div><\/div><\/div><\/section>\n

Levchenko A, Malov S, Antonik A, Protsvetkina A, Rybakova KV, Kanapin A, Yakovlev AN, Nenasteva AY, Nikolishin AE, Cherkasov N, Chuprova NA, Blagonravova AS, Sergeeva AV, Zhilyaeva TV, Denisenko MK, Gainetdinov RR, Kibitov AO, Krupitsky EM.
\nA Genome-Wide Association Study Reveals a\u00a0BDNF<\/i>-Centered Molecular Network Associated with Alcohol Dependence and Related Clinical Measures.
\nBiomedicines. 2022 Nov 22;10(12):3007.
\ndoi: 10.3390\/biomedicines10123007. PMID: 36551763; PMCID: PMC9775455.<\/p>\n<\/div><\/div><\/div><\/section>\n

Rozhmina T, Samsonova A, Kanapin A, Samsonova M.
\nAn account of Fusarium wilt resistance in flax Linum usitatissimum: The disease severity data.
\nData Brief. 2022 Jan 25; 41:107869. doi:10.1016\/j.dib.2022.107869. PMID: 35146091; PMCID: PMC8816659.<\/p>\n<\/div><\/div><\/div><\/section>\n

Duk M, Kanapin A, Rozhmina T, Bankin M, Surkova S, Samsonova A, Samsonova M.
\nThe Genetic Landscape of Fiber Flax.
\nFront Plant Sci. 2021 Dec 7;
\n12:764612. doi:10.3389\/fpls.2021.764612. PMID: 34950165; PMCID: PMC8691122.<\/p>\n<\/div><\/div><\/div><\/section>\n

Pavlov S, Gursky VV, Samsonova M, Kanapin A, Samsonova A.
\nStochastic Effects in Retrotransposon Dynamics Revealed by Modeling under Competition for Cellular Resources.
\nLife (Basel). 2021 Nov 9; 11(11):1209. doi: 10.3390\/life11111209.
\nPMID: 34833085; PMCID: PMC8625273.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kanapin A, Bankin M, Rozhmina T, Samsonova A, Samsonova M.
\nGenomic Regions Associated with Fusarium Wilt Resistance in Flax.
\nInt J Mol Sci. 2021 Nov 17;22(22):12383. doi: 10.3390\/ijms222212383. PMID: 34830265; PMCID: PMC8623186.<\/p>\n<\/div><\/div><\/div><\/section>\n

Rozhmina T, Bankin M, Samsonova A, Kanapin A, Samsonova M.
\nA comprehensive dataset of flax (Linum uitatissimum L.) phenotypes.
\nData Brief. 2021 Jun 13;37:107224. doi: 10.1016\/j.dib.2021.107224. PMID: 34189209; PMCID: PMC8220315.<\/p>\n<\/div><\/div><\/div><\/section>\n

Samsonova A, Kanapin A, Bankin M, Logachev A, Gretsova M, Rozhmina T,
\nSamsonova M.
\nA Genomic Blueprint of Flax Fungal Parasite Fusarium oxysporum f. sp. lini.
\nInt J Mol Sci. 2021 Mar 6;22(5):2665. doi:10.3390\/ijms22052665. PMID: 33800857; PMCID: PMC7961770.<\/p>\n<\/div><\/div><\/div><\/section>\n

Blaszczak W, Liu G, Zhu H, Barczak W, Shrestha A, Albayrak G, Zheng S, Kerr D, Samsonova A, La Thangue NB.
\nImmune modulation underpins the anti-cancer activity of HDAC inhibitors. Mol Oncol. 2021 Dec;15(12):3280-3298. doi:10.1002\/1878-0261.12953. Epub 2021 May 1. PMID: 33773029; PMCID: PMC8637571.<\/p>\n

2021<\/p>\n<\/div><\/div><\/div><\/section>\n

Levchenko A, Kanapin A, Samsonova A, Fedorenko OY, Kornetova EG, Nurgaliev T, Mazo GE, Semke AV, Kibitov AO, Bokhan NA, Gainetdinov RR, Ivanova SA.
\nA genome-wide association study identifies a gene network associated with paranoid schizophrenia and antipsychotics-induced tardive dyskinesia. Prog Neuropsychopharmacol Biol Psychiatry. 2021 Mar 8;105:110134. doi:
\n10.1016\/j.pnpbp.2020.110134. Epub 2020 Oct 13. PMID: 33065217.<\/p>\n

2021<\/p>\n<\/div><\/div><\/div><\/section>\n

Shevchenko AK, Zhernakova DV, Malov SV, Komissarov A, Kolchanova SM, Tamazian G, Antonik A, Cherkasov N, Kliver S, Turenko A, Rotkevich M, Evsyukov I, Vlahov D, Thami PK, Gaseitsiwe S, Novitsky V, Essex M, O’Brien SJ.
\nGenome-wide association study reveals genetic variants associated with HIV-1C infection in a Botswana study population.
\nProc Natl Acad Sci U S A. 2021 Nov 23;118(47):e2107830118.
\ndoi: 10.1073\/pnas.2107830118. PMID: 34782459; PMCID:PMC8672799.<\/p>\n

2021<\/p>\n<\/div><\/div><\/div><\/section>\n

Tamazian G, Dobrynin P, Zhuk A, Zhernakova DV, Perelman PL, Serdyukova NA, Graphodatsky AS, Komissarov A, Kliver S, Cherkasov N, Scott AF, Mohr DW, Koepfli KP, O’Brien SJ, Krasheninnikova K.
\nDraft de novo Genome Assembly of the Elusive Jaguarundi, Puma yagouaroundi.
\nJ Hered. 2021 Nov 1;112(6):540-548. doi:
\n10.1093\/jhered\/esab036. PMID: 34146095; PMCID: PMC8558579.<\/p>\n<\/div><\/div><\/div><\/section>\n

Duk MA, Gursky VV, Samsonova MG, Surkova SY.
\nApplication of Domain- and Genotype- Specific Models to Infer Post Transcriptional Regulation of Segmentation Gene Expression in Drosophila. Life (Basel). 2021 Nov 13;11(11):1232. doi: 10.3390\/life11111232. PMID: 34833107; PMCID: PMC8618293.<\/p>\n<\/div><\/div><\/div><\/section>\n

Malov, S.V.
\nUniform convergence rate of the nonparametric maximum likelihood estimator for current status data with competing risks.
\nStatistics 55(1),2021, 155-172, doi: 10.1080\/02331888.2020.1811281.<\/p>\n<\/div><\/div><\/div><\/section>\n

Zhernakova DV, Brukhin V, Malov S, Oleksyk TK, Koepfli KP, Zhuk A, Dobrynin P, Kliver S, Cherkasov N, Tamazian G, Rotkevich M, Krasheninnikova K, Evsyukov I, Sidorov S, Gorbunova A, Chernyaeva E, Shevchenko A, Kolchanova S, Komissarov A, Simonov S, Antonik A, Logachev A, Polev DE, Pavlova OA, Glotov AS, Ulantsev V, Noskova E, Davydova TK, Sivtseva TM, Limborska S, Balanovsky O, Osakovsky V, Novozhilov A, Puzyrev V, O’Brien SJ.
\nGenome-wide sequence analyses of ethnic populations across Russia.
\nGenomics. 2020 Jan;112(1):442-458.
\ndoi: 10.1016\/j.ygeno.2019.03.007. Epub 2019 Mar 19. PMID: 30902755.<\/p>\n<\/div><\/div><\/div><\/section>\n

Levchenko A, Kanapin A, Samsonova A, Fedorenko OY, Kornetova EG, Nurgaliev T, Mazo GE, Semke AV, Kibitov AO, Bokhan NA, Gainetdinov RR, Ivanova SA.
\nA genome-wide association study identifies a gene network associated with paranoid schizophrenia and antipsychotics-induced tardive dyskinesia. Prog Neuropsychopharmacol Biol Psychiatry. 2021 Mar 8;105:110134. doi:
\n10.1016\/j.pnpbp.2020.110134. Epub 2020 Oct 13. PMID: 33065217.<\/p>\n<\/div><\/div><\/div><\/section>\n

Barczak W, Jin L, Carr SM, Munro S, Ward S, Kanapin A, Samsonova A, La Thangue NB.
\nPRMT5 promotes cancer cell migration and invasion through the E2F pathway.
\nCell Death Dis. 2020 Jul 24;11(7):572. doi: 10.1038\/s41419-020-02771-9.
\nPMID: 32709847; PMCID: PMC7382496.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kanapin A, Samsonova A, Rozhmina T, Bankin M, Logachev A, Samsonova M.
\nThe Genome Sequence of Five Highly Pathogenic Isolates of Fusarium oxysporum f. sp. lini.
\nMol Plant Microbe Interact. 2020 Sep;33(9):1112-1115.
\ndoi: 10.1094\/MPMI-05-20-0130-SC. Epub 2020 Jul 22. PMID: 32568599.<\/p>\n<\/div><\/div><\/div><\/section>\n

Levchenko A, Nurgaliev T, Kanapin A, Samsonova A, Gainetdinov RR.
\nCurrent challenges and possible future developments in personalized psychiatry with an emphasis on psychotic disorders.
\nHeliyon. 2020 May 20;6(5):e03990.
\ndoi:10.1016\/j.heliyon.2020.e03990. PMID: 32462093; PMCID: PMC7240336.<\/p>\n<\/div><\/div><\/div><\/section>\n

Tatkiewicz W, Dickie J, Bedford F, Jones A, Atkin M, Kiernan M, Maze EA, Agit B, Farnham G, Kanapin A, Belshaw R.
\nCharacterising a human endogenous retrovirus(HERV)-derived tumour-associated antigen: enriched RNA-Seq analysis of HERV-K(HML-2) in mantle cell lymphoma cell lines.
\nMob DNA. 2020 Feb 7;11:9.
\ndoi: 10.1186\/s13100-020-0204-1. Erratum in: Mob DNA. 2020 Nov 30; 11(1):31. PMID: 32055257; PMCID: PMC7007669.<\/p>\n<\/div><\/div><\/div><\/section>\n

Gooley RM, Tamazian G, Casta?eda-Rico S, Murphy KR, Dobrynin P, Ferrie GM,Haefele H, Maldonado JE, Wildt DE, Pukazhenthi BS, Edwards CW, Koepfli KP.
\nComparison of genomic diversity and structure of sable antelope (Hippotragus niger) in zoos, conservation centers, and private ranches in North America.
\nEvol Appl. 2020 Apr 27;13(8):2143-2154. doi: 10.1111\/eva.12976. PMID: 32908610;PMCID: PMC7463370.<\/p>\n<\/div><\/div><\/div><\/section>\n

Humble E, Dobrynin P, Senn H, Chuven J, Scott AF, Mohr DW, Dudchenko O, Omer AD, Colaric Z, Lieberman Aiden E, Al Dhaheri SS, Wildt D, Oliaji S, Tamazian G, Pukazhenthi B, Ogden R, Koepfli KP.
\nChromosomal-level genome assembly of the scimitar-horned oryx: Insights into diversity and demography of a species extinct in the wild.
\nMol Ecol Resour. 2020 Nov;20(6):1668-1681. Epub 2020 Jun 7. Erratum in: Mol Ecol Resour. 2021
\nApr;21(3):999.
\ndoi: 10.1111\/1755-0998.13181.
\nPMID: 32365406.<\/p>\n<\/div><\/div><\/div><\/section>\n

Malov, S.V., Antonik, A. & Shevchenko, A.K. (2020)
\nOn region based inference in genome wide association study.
\nAbstracts of the Twelfth International Multiconference \u201cBioinformatics of
\nGenome Regulation and Structure\/Systems Biology (BGRS\/SB-2020)\u201d (06\u201310 July 2020, Novosibirsk, Russia), 177\u2013178. DOI: 10.18699\/BGRS\/SB-2020-111.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kaito Mizumachi, Sergei V. Gorbunov, Alexander A. Vasilevski, Tetsuya Amano, Hiroko Ono, Pavel A. Kosintsev, Daisuke Hirata, Yoshinori Nishita, Ryuichi Masuda. (2020).
\nPhylogenetic relationships of ancient brown bears (Ursus arctos) on Sakhalin Island, revealed by APLP and PCR-direct sequencing analyses of mitochondrial DNA.
\nMammal Research. 66:95-102.<\/p>\n<\/div><\/div><\/div><\/section>\n

Kaito Mizumachi, Nikolai Spassov, Dimitar Kostov, Evgeniy G Raichev, Stanislava Peeva, Daisuke Hirata, Yoshinori Nishita, Yayoi Kaneko, Ryuichi Masuda. (2020).
\nMitochondrial haplogrouping of the ancient brown bears (Ursus arctos) in Bulgaria, revealed by the APLP method.
\nMammal Research. 65: 413-421.<\/p>\n<\/div><\/div><\/div><\/section>\n

Roworth AP, Carr SM, Liu G, Barczak W, Miller RL, Munro S, Kanapin A,
\nSamsonova A, La Thangue NB.
\nArginine methylation expands the regulatory mechanisms and extends the genomic landscape under E2F control.
\nSci Adv. 2019 Jun 26;5(6):eaaw4640. doi: 10.1126\/sciadv.aaw4640. PMID: 31249870; PMCID: PMC6594773.<\/p>\n<\/div><\/div><\/div><\/section>\n

Koepfli KP, Tamazian G, Wildt D, Dobrynin P, Kim C, Frandsen PB, Godinho R, Yurchenko AA, Komissarov A, Krasheninnikova K, Kliver S, Kolchanova S, Gon?alves M, Carneiro M, Pinto PV, Ferrand N, Maldonado JE, Ferrie GM, Chemnick L, Ryder OA, Johnson WE, Comizzoli P, O’Brien SJ, Pukazhenthi BS.
\nWhole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A Resource for Monitoring Diversity in ex Situ and in Situ Populations.
\nG3(Bethesda). 2019 Jun 5;9(6):1785-1793. doi: 10.1534\/g3.119.400084. PMID:31000506; PMCID: PMC6553546.<\/p>\n<\/div><\/div><\/div><\/section>\n

Makashov, A., Malov, S.V. & Kozlov, A.P. (2019)
\nOncogenes, tumor suppressor and differentiation genes represent the oldest human gene classes and evolve concurrently. Scientific Reports 9:16410, DOI: 10.1038\/s41598-019-52835-w<\/p>\n<\/div><\/div><\/div><\/section>\n

Malova, I.Yu., Malov, S.V. (2019)
\nOn estimation algorithms in nonparametric analysis of the current status right-censored data. In Applied Methods of Statistical Analysis. Statistical Computation and Simulation.
\nProceedings of the International Workshop AMSA’19 (Novosibirsk, September 18-20, 2019), 74\u201384.<\/p>\n

2019<\/p>\n<\/div><\/div><\/div><\/section>\n

Malov, S.V. (2019).
\nNonparametric estimation for a current status right-censored data model.
\nStatistica Neerlandica 73(4), 475-495, DOI: 10.1111\/stan.12180.<\/p>\n<\/div><\/div><\/div><\/section>\n

Robbe P, Popitsch N, Knight SJL, Antoniou P, Becq J, He M, Kanapin A,
\nSamsonova A, Vavoulis DV, Ross MT, Kingsbury Z, Cabes M, Ramos SDC, Page S, Dreau H, Ridout K, Jones LJ, Tuff-Lacey A, Henderson S, Mason J, Buffa FM, Verrill C, Maldonado-Perez D, Roxanis I, Collantes E, Browning L, Dhar S, Damato S, Davies S, Caulfield M, Bentley DR, Taylor JC, Turnbull C, Schuh A;
\n100,000 Genomes Project. Clinical whole-genome sequencing from routine formalin-fixed, paraffin-embedded specimens: pilot study for the 100,000 Genomes Project.
\nGenet Med. 2018 Oct;20(10):1196-1205. doi: 10.1038\/gim.2017.241.
\nEpub 2018 Feb 1.
\nPMID: 29388947; PMCID: PMC6520241.<\/p>\n<\/div><\/div><\/div><\/section>\n

Levchenko A, Kanapin A, Samsonova A, Gainetdinov RR.
\nHuman Accelerated Regions and Other Human-Specific Sequence Variations in the Context of Evolution and Their Relevance for Brain Development. Genome Biol Evol. 2018 Jan 1; 10(1):166-188. doi: 10.1093\/gbe\/evx240. PMID: 29149249; PMCID: PMC5767953.<\/p>\n<\/div><\/div><\/div><\/section>\n

Psallidas I, Kanellakis NI, Gerry S, Th?z?nas ML, Charles PD, Samsonova A, Schiller HB, Fischer R, Asciak R, Hallifax RJ, Mercer R, Dobson M, Dong T, Pavord ID, Collins GS, Kessler BM, Pass HI, Maskell N, Stathopoulos GT, Rahman NM.
\nDevelopment and validation of response markers to predict survival and pleurodesis success in patients with malignant pleural effusion (PROMISE): a multicohort analysis.
\nLancet Oncol. 2018 Jul;19(7):930-939. doi: 10.1016\/S1470-2045(18)30294-8. Epub 2018 Jun 13. PMID: 29908990.<\/p>\n<\/div><\/div><\/div><\/section>\n

Papaspyropoulos A, Bradley L, Thapa A, Leung CY, Toskas K, Koennig D, Pefani DE, Raso C, Grou C, Hamilton G, Vlahov N, Grawenda A, Haider S, Chauhan J, Buti L, Kanapin A, Lu X, Buffa F, Dianov G, von Kriegsheim A, Matallanas D, Samsonova A, Zernicka-Goetz M, O’Neill E.
\nRASSF1A uncouples Wnt from Hippo signalling and promotes YAP mediated differentiation via p73.
\nNat Commun. 2018 Jan 30;9(1):424.
\ndoi: 10.1038\/s41467-017-02786-5. PMID: 29382819; PMCID: PMC5789973.<\/p>\n<\/div><\/div><\/div><\/section>\n

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