— a Python package that implements reading, writing, and transforming genomic intervals between various bioinformatic data file formats. The package routines can be easily incorporated into Snakemake pipelines or other bioinformatic data processing workflows.
Structural variant warehouse
— a resource containing annotated patterns of sequence coverage signals, as well as statistical models of signal profiles associated with five main types of structural variation. The database contains approximately 23 million patterns extracted from the whole genome sequencing data provided by several large-scale genomics projects (e.g., HGDP). A robust and flexible graphical user interface enables smooth data visualization, management and download, which increases usability of the data and enables its uses in other applications.
Shirokuma - Polar bear genomics project
– Shirokuma (しろくま シロクマ 白熊 – Polar Bear in Japanese) is a an educational resource and a curated catalog of polar bear (Ursus Maritimus) specimens housed at the Zoological Institute of the Russian Academy of Sciences. This work is carried out in the framework of the RSF grant 22-74-00038